1T5B

Structural genomics, A protein from Salmonella typhimurium similar to E. coli acyl carrier protein phosphodiesterase

Structural Biology Knowledgebase: 1T5B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1T5B

Classification: HYDROLASE

Total Structure Weight: 44212.63

Macromolecule Entities
Molecule Chains Length Organism Details
Acyl carrier protein phosphodiesterase A, B 201 Salmonella enterica EC#: 3.1.4.14 IUBMB
Gene Name(s): azoR acpD STM1642
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.196
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 40.89 α = 90.00
b = 107.92 β = 111.45
c = 51.17 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-05-03
  • Released Date: 2004-08-03
  • Deposition author(s): Zhang, R., Wu, R., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4