1S2Q

Crystal structure of MAOB in complex with N-propargyl-1(R)-aminoindan (Rasagiline)

Structural Biology Knowledgebase: 1S2Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.207

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1S2Q

Classification: OXIDOREDUCTASE

Total Structure Weight: 119594.30

Macromolecule Entities
Molecule Chains Length Organism Details
Amine oxidase [flavin-containing] B A, B 520 Homo sapiens EC#: 1.4.3.4 IUBMB
Gene Name(s): MAOB Gene View

Membrane Protein

Source: inferred by homology | Group: MONOTOPIC MEMBRANE PROTEINS

Subgroup Name: Oxidases

Protein Name: Monoamine Oxidase B


Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
RAS
Query on RAS

A, B (1R)-N-(prop-2-en-1-yl)-2,3-dihydro-1H-inden- 1-amine
RASAGILINE, BOUND FORM (Synonym)
C12 H15 N
RPAZWTZFMPXUKS-GFCCVEGCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.207
  • Space Group: C 2 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 132.92 α = 90.00
b = 224.33 β = 90.00
c = 86.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-01-09
  • Released Date: 2004-03-30
  • Deposition author(s): Binda, C., Hubalek, F., Li, M., Herzig, Y., Sterling, J., Edmondson, D.E., Mattevi, A.

Revision History

  • 2012-02-22
    Type: Non-polymer description | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4