1R6B

High resolution crystal structure of ClpA

Structural Biology Knowledgebase: 1R6B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.234

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1R6B

Classification: HYDROLASE

Total Structure Weight: 85231.90

Macromolecule Entities
Molecule Chains Length Organism Details
ClpA protein X 758 Escherichia coli Mutation: M169L, G367A, V411L, V533L
Gene Name(s): clpA lopD b0882 JW0866

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

X ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

X MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.278
  • R-Value Work: 0.234
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 124.11 α = 90.00
b = 124.11 β = 90.00
c = 97.05 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-15
  • Released Date: 2004-08-24
  • Deposition author(s): Xia, D., Maurizi, M.R., Guo, F., Singh, S.K., Esser, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4