1R1Y

Crystal structure of deoxy-human hemoglobin Bassett at 1.8 angstrom

Structural Biology Knowledgebase: 1R1Y SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.183

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1R1Y

Classification: OXYGEN TRANSPORT

Total Structure Weight: 64651.91

Macromolecule Entities
Molecule Chains Length Organism Details
Hemoglobin alpha chain A, C 141 Homo sapiens Mutation: D94A
Gene Name(s): HBA1 Gene View HBA2 Gene View
Hemoglobin beta chain B, D 146 Homo sapiens Gene Name(s): HBB Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B, C, D PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

B, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.183
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 62.47 α = 90.00
b = 82.25 β = 100.21
c = 53.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-09-25
  • Released Date: 2003-10-07
  • Deposition author(s): Abdulmalik, O., Safo, M.K., Lerner, N.B., Ochotorena, J., Dhaikin, Y., Abraham, D.J., Asakura, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4