1QG4

CANINE GDP-RAN F72Y MUTANT

Structural Biology Knowledgebase: 1QG4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.174

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1QG4

Classification: GTPASE

Total Structure Weight: 49879.61

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (RAN) A, B 216 Canis lupus EC#: 2.1.1.64 IUBMB
Fragment: ALL
Mutation: F72Y
Gene Name(s): RAN Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.237
  • R-Value Work: 0.174
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 60.52 α = 90.00
b = 60.17 β = 101.77
c = 61.44 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-04-20
  • Released Date: 1999-06-11
  • Deposition author(s): Kent, H.M., Moore, M.S., Quimby, B.B., Baker, A.M.E., McCoy, A.J., Murphy, G.A., Corbett, A.H., Stewart, M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4