1OAP

Mad structure of the periplasmique domain of the Escherichia coli PAL protein

Structural Biology Knowledgebase: 1OAP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.200

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1OAP

Classification: LIPOPROTEIN

Total Structure Weight: 12507.97

Macromolecule Entities
Molecule Chains Length Organism Details
PEPTIDOGLYCAN-ASSOCIATED LIPOPROTEIN A 109 Escherichia coli Fragment: PERIPLASMIC DOMAIN, RESIDUES 65-137
Gene Name(s): pal excC b0741 JW0731
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.93 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.200
  • Space Group: I 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 88.57 α = 90.00
b = 88.57 β = 90.00
c = 68.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-20
  • Released Date: 2004-02-13
  • Deposition author(s): Abergel, C., Walburger, A., Bouveret, E., Claverie, J.M.

Revision History

  • 2014-02-05
    Type: Citation | Details: JRNL
  • 2014-02-05
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2014-02-05
    Type: Version format compliance | Details: REMARK 4
  • 2014-02-05
    Type: Refinement description | Details: REMARK 3
  • 2014-02-05
    Type: Non-polymer description | Details: FORMUL
  • 2014-02-05
    Type: Other | Details: REMARK 525
  • 2014-02-05
    Type: Geometry validation | Details: REMARK 500