1NRW

The structure of a HALOACID DEHALOGENASE-LIKE HYDROLASE FROM B. SUBTILIS

Structural Biology Knowledgebase: 1NRW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NRW

Classification: Hydrolase

Total Structure Weight: 32777.82

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical protein, haloacid dehalogenase-like hydrolase A 288 Bacillus subtilis Mutation: M1M, M49M, M244M, M254M, M280M, M281M
Gene Name(s): ywpJ BSU36290

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.194
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 53.12 α = 90.00
b = 68.42 β = 90.00
c = 95.03 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-25
  • Released Date: 2003-07-29
  • Deposition author(s): Cuff, M.E., Kim, Y., Zhang, R., Joachimiak, A., Collart, F., Quartey, P., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4