1NLT

The crystal structure of Hsp40 Ydj1

Structural Biology Knowledgebase: 1NLT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.269

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NLT

Classification: PROTEIN TRANSPORT

Total Structure Weight: 28386.53

Macromolecule Entities
Molecule Chains Length Organism Details
Mitochondrial protein import protein MAS5 A 248 Saccharomyces cerevisiae Fragment: C terminal domain
Mutation: F335D
Gene Name(s): YDJ1 MAS5 YNL064C N2418 YNL2418C
Seven residue peptide B 7 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.296
  • R-Value Work: 0.269
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.03 α = 90.00
b = 55.03 β = 90.00
c = 161.87 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-07
  • Released Date: 2004-01-13
  • Deposition author(s): Li, J., Sha, B.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4