1MKM

CRYSTAL STRUCTURE OF THE THERMOTOGA MARITIMA ICLR

Structural Biology Knowledgebase: 1MKM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.232

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1MKM

Classification: TRANSCRIPTION

Total Structure Weight: 57069.24

Macromolecule Entities
Molecule Chains Length Organism Details
IclR transcriptional regulator A, B 249 Thermotoga maritima Gene Name(s): TM_0065 Tmari_0062

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
FMT
Query on FMT

A FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.232
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 115.23 α = 90.00
b = 61.08 β = 110.51
c = 95.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-08-29
  • Released Date: 2002-09-11
  • Deposition author(s): Kim, Y., Zhang, R.G., Joachimiak, A., Skarina, T., Edwards, A., Savchenko, A., Midwest Center for Structural Genomics (MCSG)
  • Previous versions: 1JMR

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4