1M2D

Crystal structure at 1.05 Angstroms resolution of the Cys59Ser variant of the thioredoxin-like [2Fe-2S] ferredoxin from Aquifex aeolicus

Structural Biology Knowledgebase: 1M2D SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.137

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1M2D

Classification: ELECTRON TRANSPORT

Total Structure Weight: 24732.03

Macromolecule Entities
Molecule Chains Length Organism Details
[2Fe-2S] ferredoxin A, B 110 Aquifex aeolicus Mutation: C59S
Gene Name(s): fdx4 aq_107 aq_108A

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FES
Query on FES

A, B FE2/S2 (INORGANIC) CLUSTER
Fe2 S2
NIXDOXVAJZFRNF-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.162
  • R-Value Work: 0.137
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 67.30 α = 90.00
b = 59.80 β = 109.30
c = 46.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-06-22
  • Released Date: 2002-09-18
  • Deposition author(s): Yeh, A.P., Ambroggio, X.I., Andrade, S.L.A., Einsle, O., Chatelet, C., Meyer, J., Rees, D.C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4