1KZ4

Mutant enzyme W63Y Lumazine Synthase from S.pombe

Structural Biology Knowledgebase: 1KZ4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.194

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1KZ4

Classification: TRANSFERASE

Total Structure Weight: 86394.36

Macromolecule Entities
Molecule Chains Length Organism Details
6,7-Dimethyl-8-ribityllumazine Synthase A, B, C, D, E 159 Schizosaccharomyces pombe EC#: 2.5.1.78 IUBMB
Mutation: W63Y
Gene Name(s): rib4 SPBC409.13

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B, C, D, E PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.194
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 111.94 α = 90.00
b = 145.92 β = 90.00
c = 129.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-02-06
  • Released Date: 2002-07-24
  • Deposition author(s): Gerhardt, S., Haase, I., Steinbacher, S., Kaiser, J.T., Cushman, M., Bacher, A., Huber, R., Fischer, M.

Revision History

  • 2013-01-23
    Type: Polymer description | Details: update EC number
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4