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Crystal structure of Ras-Bry2RBD complex
 
 
DOI:10.2210/pdb1k8r/pdb
1K8R
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Signaling Protein
    Structure Weight: 31848.20
     
    Molecule:Transforming protein P21/H-RAS-1
    Polymer:1Type:polypeptide(L)Length:166
    Chains:A
    Fragment:GTP-binding/catalytic domain, residues 1-166
    Molecule:Protein kinase byr2
    Polymer:2Type:polypeptide(L)Length:110
    Chains:B
    EC#:2.7.1.- Go to IUBMB EC entry  
    Fragment:Ras binding domain (RBD), residues 71-180
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens Go to NCBI Taxonomy entry Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Schizosaccharomyces pombe Go to NCBI Taxonomy entry Common Name: Fission yeast Expression System: Escherichia coli bl21  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1C1Y  Crystal Structure Of Rap. Gmppnp In Complex With The Ras- Binding-Domain Of C-Raf1 Kinase (Rafrbd). 
    1HE8  Ras G12V - 3-Kinase Complex 
    1LFD  Crystal Structure Of The Active Ras Protein Complexed With The Ras-Interacting Domain Of Ralgds 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    GNP     PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER C10 H17 N6 O13 P3 3DLigand Explorer Link out to Ligand Expos:GNP Link out to SuperLigands:GNP Link out to SuperHapten:GNP
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Scheffzek, K.,   Gruenewald, P.,   Wohlgemuth, S.,   Kabsch, W.,   Tu, H.,   Wigler, M.,   Wittinghofer, A.,   Herrmann, C.

    Deposition:   2001-10-25
    Release:   2002-03-13
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 3.00
    R-Value: 0.240 (obs.)
    R-Free: 0.305
    Space Group: H 3 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 139.03 α = 90.00 
    b = 139.03 β = 90.00 
    c = 112.80 γ = 120.00