1K2F

siah, Seven In Absentia Homolog

Structural Biology Knowledgebase: 1K2F SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.220

Literature

Macromolecules
Sequence Display for 1K2F

Classification: LIGASE PROTEIN BINDING

Total Structure Weight: 43552.12

Macromolecule Entities
Molecule Chains Length Organism Details
siah-1A protein A, B 190 Mus musculus EC#: 6.3.2 IUBMB
Fragment: C-terminal domain (residues 93-282)
Gene Name(s): Siah1a
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BME
Query on BME

A, B BETA-MERCAPTOETHANOL
C2 H6 O S
DGVVWUTYPXICAM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.277
  • R-Value Work: 0.220
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 66.47 α = 90.00
b = 73.97 β = 90.00
c = 80.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-09-26
  • Released Date: 2001-12-28
  • Deposition author(s): Polekhina, G., House, C.M., Traficante, N., Mackay, J.P., Relaix, F., Sassoon, D.A., Parker, M.W., Bowtell, D.D.L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4