1JO8

Structural analysis of the yeast actin binding protein Abp1 SH3 domain

Structural Biology Knowledgebase: 1JO8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.144

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1JO8

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 6855.27

Macromolecule Entities
Molecule Chains Length Organism Details
ACTIN BINDING PROTEIN A 58 Saccharomyces cerevisiae Fragment: SH3 domain
Gene Name(s): ABP1 YCR088W YCR88W

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.3 Å
  • R-Value Free: 0.178
  • R-Value Work: 0.144
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 24.08 α = 90.00
b = 38.15 β = 90.00
c = 59.09 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-27
  • Released Date: 2002-03-01
  • Deposition author(s): Fazi, B., Cope, M.J., Douangamath, A., Ferracuti, S., Schirwitz, K., Zucconi, A., Drubin, D.G., Wilmanns, M., Cesareni, G., Castagnoli, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4