1JI0

Crystal Structure Analysis of the ABC transporter from Thermotoga maritima

Structural Biology Knowledgebase: 1JI0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.242

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1JI0

Classification: TRANSPORT PROTEIN

Total Structure Weight: 27251.37

Macromolecule Entities
Molecule Chains Length Organism Details
ABC transporter A 240 Thermotoga maritima Mutation: M80M, M102M, M103M, M146M, M154M, M161M, M162M, M230M
Gene Name(s): TM_1139 Tmari_1145
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.264
  • R-Value Work: 0.242
  • Space Group: P 41 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 51.07 α = 90.00
b = 51.07 β = 90.00
c = 202.69 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-06-28
  • Released Date: 2002-08-14
  • Deposition author(s): Zhang, R., Joachimiak, A., Edwards, A., Savchenko, A., Beasley, S., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4