Macromolecules
Sequence Display for 1JDI

Classification: ISOMERASE

Total Structure Weight: 153583.81

Macromolecule Entities
Molecule Chains Length Organism Details
L-RIBULOSE 5 PHOSPHATE 4-EPIMERASE A, B, C..., D, E, FA, B, C, D, E, F 231 Escherichia coli EC#: 5.1.3.4 IUBMB
Gene Name(s): araD b0061 JW0060
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D, E, F ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.208
  • Space Group: P 4 21 2

Unit Cell:

Length (Å) Angle (°)
a = 105.90 α = 90.00
b = 105.90 β = 90.00
c = 274.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-06-13
  • Released Date: 2002-01-23
  • Deposition author(s): Luo, Y., Samuel, J., Mosimann, S.C., Lee, J.E., Tanner, M.E., Strynadka, N.C.J.

Revision History

  • Version 1_0: 2002-01-23

    Type: Initial release

  • Version 1_1: 2008-04-27

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Derived calculations, Source and taxonomy, Version format compliance