1J32

Aspartate Aminotransferase from Phormidium lapideum

Structural Biology Knowledgebase: 1J32 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1J32

Classification: TRANSFERASE

Total Structure Weight: 84781.55

Macromolecule Entities
Molecule Chains Length Organism Details
aspartate aminotransferase A, B 388 Phormidium lapideum EC#: 2.6.1.1 IUBMB
Gene Name(s): aspC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A, B PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.238
  • R-Value Work: 0.198
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 120.22 α = 90.00
b = 131.26 β = 90.00
c = 107.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-01-17
  • Released Date: 2003-02-04
  • Deposition author(s): Kim, H., Sawa, Y., Hamada, K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update