1IUP

meta-Cleavage product hydrolase from Pseudomonas fluorescens IP01 (CumD) S103A mutant complexed with isobutyrates

Structural Biology Knowledgebase: 1IUP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.188

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1IUP

Classification: HYDROLASE

Total Structure Weight: 31771.18

Macromolecule Entities
Molecule Chains Length Organism Details
meta-Cleavage product hydrolase A 282 Pseudomonas fluorescens EC#: 3.7.1.9 IUBMB
Mutation: S103A
Gene Name(s): cumD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ALQ
Query on ALQ

A 2-METHYL-PROPIONIC ACID
C4 H8 O2
KQNPFQTWMSNSAP-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ALQ N/A in BindingDB
Ki: 2900000 nM  BindingMOAD
Ki: 2900000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.188
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 77.35 α = 90.00
b = 116.58 β = 90.00
c = 78.72 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-06
  • Released Date: 2002-09-18
  • Deposition author(s): Fushinobu, S., Saku, T., Hidaka, M., Jun, S.-Y., Nojiri, H., Yamane, H., Shoun, H., Omori, T., Wakagi, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4