1HMA

THE SOLUTION STRUCTURE AND DYNAMICS OF THE DNA BINDING DOMAIN OF HMG-D FROM DROSOPHILA MELANOGASTER

• PDB DOI: https://doi.org/10.2210/pdb1HMA/pdb

• Classification: DNA-BINDING
• Organism(s): Drosophila melanogaster
• Mutation(s): No 


• Deposited: 1994-05-12 Released: 1994-07-31 
• Deposition Author(s): Jones, D.N.M., Searles, M.A., Shaw, G.L., Churchill, M.E.A., Ner, S.S., Keeler, J., Travers, A.A., Neuhaus, D.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Submitted: 20 

Literature

The solution structure and dynamics of the DNA-binding domain of HMG-D from Drosophila melanogaster.

Jones, D.N., Searles, M.A., Shaw, G.L., Churchill, M.E., Ner, S.S., Keeler, J., Travers, A.A., Neuhaus, D.

(1994) Structure 2: 609-627

• PubMed: 7922039 
• DOI: https://doi.org/10.1016/s0969-2126(00)00063-0
• Primary Citation of Related Structures:  
  1HMA


• PubMed Abstract: 
  

  The HMG-box is a conserved DNA-binding motif that has been identified in many high mobility group (HMG) proteins. HMG-D is a non-histone chromosomal protein from Drosophila melanogaster that is closely related to the mammalian HMG-box proteins HMG-1 and HMG-2. Previous structures determined for an HMG-box domain from rat and hamster exhibit the same global topology, but differ significantly in detail. It has been suggested that these differences may arise from hinge motions which allow the protein to adapt to the shape of its target DNA.

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Organizational Affiliation: 

MRC Laboratory of Molecular Biology, Cambridge, UK.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 8.37 kDa 
• Atom Count: 588 
• Modelled Residue Count: 73 
• Deposited Residue Count: 73 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
HMG-D	A	73	Drosophila melanogaster	Mutation(s): 0
UniProt
Find proteins for Q05783 (Drosophila melanogaster) Explore Q05783  Go to UniProtKB:  Q05783

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Submitted: 20 

Structure Validation

Entry History 

Deposition Data

• Released Date: 1994-07-31 
Deposition Author(s): Jones, D.N.M., Searles, M.A., Shaw, G.L., Churchill, M.E.A., Ner, S.S., Keeler, J., Travers, A.A., Neuhaus, D.

Revision History  

• Version 1.0: 1994-07-31
  Type: Initial release
  
• Version 1.1: 2008-03-24
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2022-02-23
  Changes: Database references, Derived calculations, Other