1EJD

Crystal structure of unliganded mura (type1)

Structural Biology Knowledgebase: 1EJD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1EJD

Classification: TRANSFERASE

Total Structure Weight: 91585.18

Macromolecule Entities
Molecule Chains Length Organism Details
UDP-N-ACETYLGLUCOSAMINE ENOLPYRUVYLTRANSFERASE A, B 419 Enterobacter cloacae EC#: 2.5.1.7 IUBMB
Mutation: N67X
Gene Name(s): murA murZ ECL_04571

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HAI
Query on HAI

A, B CYCLOHEXYLAMMONIUM ION
C6 H14 N
PAFZNILMFXTMIY-UHFFFAOYSA-O
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A, B PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
IAS
Query on IAS
A, B L-beta-peptide, C-gamma linking C4 H7 N O4 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.185
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 87.18 α = 90.00
b = 156.30 β = 91.63
c = 84.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-03-02
  • Released Date: 2000-10-25
  • Deposition author(s): Eschenburg, S., Schonbrunn, E.

Revision History

  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Changed residue name in the sequence
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4