1EBD

DIHYDROLIPOAMIDE DEHYDROGENASE COMPLEXED WITH THE BINDING DOMAIN OF THE DIHYDROLIPOAMIDE ACETYLASE

Structural Biology Knowledgebase: 1EBD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Observed: 0.215

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1EBD

Classification: COMPLEX (OXIDOREDUCTASE / TRANSFERASE)

Total Structure Weight: 101601.24

Macromolecule Entities
Molecule Chains Length Organism Details
DIHYDROLIPOAMIDE DEHYDROGENASE A, B 455 Geobacillus stearothermophilus EC#: 1.8.1.4 IUBMB
Gene Name(s): pdhD
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
DIHYDROLIPOAMIDE ACETYLTRANSFERASE C 41 Geobacillus stearothermophilus EC#: 2.3.1.12 IUBMB
Fragment: BINDING DOMAIN, RESIDUES 130 - 170
Gene Name(s): pdhC
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FAD
Query on FAD

A, B FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Observed: 0.215
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 106.60 α = 90.00
b = 106.60 β = 90.00
c = 204.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-02-03
  • Released Date: 1996-07-11
  • Deposition author(s): Mande, S.S., Sarfaty, S., Allen, M.D., Perham, R.N., Hol, W.G.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4