1E6I

Bromodomain from GCN5 complexed with acetylated H4 peptide

Structural Biology Knowledgebase: 1E6I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.187

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1E6I

Classification: GENE REGULATION

Total Structure Weight: 16243.60

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSCRIPTIONAL ACTIVATOR GCN5 A 121 Saccharomyces cerevisiae EC#: 2.3.1.48 IUBMB
Fragment: BROMODOMAIN
Gene Name(s): GCN5 ADA4 SWI9 YGR252W
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
HISTONE H4 P 15 Saccharomyces cerevisiae Fragment: ACETYLATED TAIL, RESIDUES 16-30
Mutation: D24N, N25S
Details: LYSINE 16 IS ACETYLATED ON NZ
Gene Name(s): HHF1 YBR009C YBR0122 HHF2 YNL030W N2752
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ALY
Query on ALY
P L-PEPTIDE LINKING C8 H16 N2 O3 LYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.87 Å
  • R-Value Free: 0.209
  • R-Value Work: 0.187
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 43.68 α = 90.00
b = 71.92 β = 90.00
c = 89.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-08-18
  • Released Date: 2000-11-24
  • Deposition author(s): Owen, D.J., Travers, A.A., Evans, P.R.

Revision History

  • 2012-11-28
    Type: Non-polymer description | Details: HETSYN,FORMUL,HETNAM
  • 2012-11-28
    Type: Geometry validation | Details: REMARK 500
  • 2012-11-28
    Type: Function and keywords | Details: KEYWDS
  • 2012-11-28
    Type: Sequence database correspondence | Details: SEQADV,DBREF
  • 2012-11-28
    Type: Atom nomenclature | Details: HETATM
  • 2012-11-28
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2012-11-28
    Type: Version format compliance | Details: REMARK 4
  • 2012-11-28
    Type: Polymer description | Details: COMPND
  • 2012-11-28
    Type: Source and taxonomy | Details: SOURCE
  • 2012-11-28
    Type: Other | Details: REMARK 375,REMARK 525,MODRES,REMARK 280