1DLU

UNLIGANDED BIOSYNTHETIC THIOLASE FROM ZOOGLOEA RAMIGERA

Structural Biology Knowledgebase: 1DLU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.212

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DLU

Classification: TRANSFERASE

Total Structure Weight: 162073.95

Macromolecule Entities
Molecule Chains Length Organism Details
BIOSYNTHETIC THIOLASE A, B, C, D 389 Zoogloea ramigera EC#: 2.3.1.9 IUBMB
Mutation: A129R
Gene Name(s): phbA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, C, D (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.263
  • R-Value Work: 0.212
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 84.71 α = 90.00
b = 79.73 β = 93.07
c = 150.48 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-12
  • Released Date: 2000-04-24
  • Deposition author(s): Modis, Y., Wierenga, R.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4