1DEQ

THE CRYSTAL STRUCTURE OF MODIFIED BOVINE FIBRINOGEN (AT ~4 ANGSTROM RESOLUTION)

Structural Biology Knowledgebase: 1DEQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.370
  • R-Value Work: 0.257

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1DEQ

Classification: BLOOD CLOTTING

Total Structure Weight: 560542.44

Macromolecule Entities
Molecule Chains Length Organism Details
FIBRINOGEN (ALPHA CHAIN) A, D, N, Q 390 Bos taurus Fragment: PSEUDOMONAS AERUGINOSA PS-1-MODIFIED FRAGMENT
Gene Name(s): FGA Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FIBRINOGEN (BETA CHAIN) B, E, O, R 408 Bos taurus Fragment: PSEUDOMONAS AERUGINOSA PS-1-MODIFIED FRAGMENT
Gene Name(s): FGB Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FIBRINOGEN (GAMMA CHAIN) C, F, P, S 411 Bos taurus Fragment: PSEUDOMONAS AERUGINOSA PS-1-MODIFIED FRAGMENT
Gene Name(s): FGG Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
FIBRINOGEN M, Z 90 Bos taurus Fragment: PSEUDOMONAS AERUGINOSA PS-1-MODIFIED FRAGMENT
Details: DISORDERED DISULFIDE KNOT REGION

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
UNK
Query on UNK
M, Z L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.370
  • R-Value Work: 0.257
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 176.01 α = 90.00
b = 94.93 β = 94.41
c = 209.80 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-11-15
  • Released Date: 2000-02-02
  • Deposition author(s): Brown, J.H., Volkmann, N., Jun, G., Henschen-Edman, A.H., Cohen, C.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4