POP-OUT | CLOSE
MyPDB Login - Username: Password:

About: MyPDB stores and automatically runs your favorite queries. Email alerts are sent when matching structures are found.

    MyPDB Login
MyPDB: Login | Register
RCSB PDB Protein Data Bank | Home A Member of the wwPDB

An Information Portal to Biological Macromolecular Structures

As of Tuesday Feb 09, 2010 at 4 PM PST there are 63271 Structures RSS Feed for the Latest Released Structures Help | Latest Released  |  PDB Statistics Help | PDB Statistics
RCSB PDB Protein Data Bank | Home

Print Options: BW Safe Color Safe Print




URL:
 
 
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 3'-5'-ADENOSINE DIPHOSPHATE
 
 
DOI:10.2210/pdb1cy0/pdb
1CY0
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Isomerase
    Structure Weight: 67970.41
     
    Molecule:DNA TOPOISOMERASE I
    Polymer:1Type:polypeptide(L)Length:599
    Chains:A
    EC#:5.99.1.2 Go to IUBMB EC entry  
    Fragment:67 KDA N-TERMINAL FRAGMENT OF E.COLI TOPOISOMERASE I
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Escherichia coli k12 Go to NCBI Taxonomy entry Expression System: Escherichia coli  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1CY1  COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'pTpTpT 
    1CY2  Complex of E.coli DNA topoisomerase I with TpTpTp3' 
    1CY4  Complex of E.coli DNA topoisomerase I with 5'pTpTpTp3' 
    1CY6  Complex of E.coli DNA topoisomerase I with 3'-thymidine monophosphate 
    1CY7  Complex of E.coli DNA topoisomerase I with 5'-thymidine monophosphate 
    1CY8  Complex of E.coli DNA topoisomerase I with 5'-thymidine monophosphate and 3'-thymidine monophosphate 
    1CY9  Crystal structure of the 30 kDa fragment of E. coli DNA topoisomerase I. Monoclinic form 
    1CYY  Crystal structure of the 30 kDa fragment of E. coli DNA topoisomerase I. Hexagonal form 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    A3P     ADENOSINE-3'-5'-DIPHOSPHATE C10 H15 N5 O10 P2 3DLigand Explorer Link out to Ligand Expos:A3P Link out to SuperLigands:A3P Link out to SuperHapten:A3P
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    A3P ADENOSINE-3'-5'-DIPHOSPHATE (parent: A)(type: rnaLinking) C10 H15 N5 O10 P2 3D Ligand Explorer Link out to Ligand Expos:A3P Link out to SuperLigands:A3P Link out to SuperHapten:A3P 2D
     
     
  •  
    Move Section Derived Data Hide
     
     
Reset Layout
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Feinberg, H.,   Changela, A.,   Mondragon, A.

    Deposition:   1999-08-31
    Release:   2000-03-08
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.45
    R-Value: 0.220 (obs.)
    R-Free: 0.274
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 63.04 α = 90.00 
    b = 73.31 β = 90.00 
    c = 134.46 γ = 90.00