1CJ1

GROWTH FACTOR RECEPTOR BINDING PROTEIN SH2 DOMAIN (HUMAN) COMPLEXED WITH A PHOSPHOTYROSYL DERIVATIVE

Structural Biology Knowledgebase: 1CJ1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.305

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1CJ1

Classification: SIGNALING PROTEIN

Total Structure Weight: 142157.27

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2) A, B, C..., D, E, F, G, H, I, J, K, LA, B, C, D, E, F, G, H, I, J, K, L 96 Homo sapiens Fragment: SH2 DOMAIN
Details: COMPLEXED WITH PHOSPHOTYROSYL DERIVATIVE
Gene Name(s): GRB2 Gene View ASH
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C78
Query on C78

A, B, C, D, E, F, G, H, I, J, K, L [1-[1-(6-CARBAMOYL-CYCLOHEX-2-ENYLCARBAMOYL)- CYCLOHEXYLCARBAMOYL]-2-(4-PHOSPHONOOXY-PHENYL)- ETHYL]-CARBAMIC ACID 3-AMINOBENZYLESTER
C31 H42 N5 O9 P
SLNOMHLVQNIGRT-NXCFDTQHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
C78 IC50: 1.6 nM (100) BindingDB

N/A in BindingMoad
IC50: 1.6 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.317
  • R-Value Work: 0.305
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.80 α = 90.00
b = 93.30 β = 90.00
c = 232.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-04-21
  • Released Date: 1999-12-22
  • Deposition author(s): Rahuel, J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4