1C76

STAPHYLOKINASE (SAK) MONOMER

PDB DOI: https://doi.org/10.2210/pdb1C76/pdb

Classification: HYDROLASE
Organism(s): Staphylococcus aureus
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2000-02-01 Released: 2000-08-01
Deposition Author(s): Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free: 0.273
R-Value Work: 0.201
R-Value Observed: 0.216

wwPDB Validation 3D Report Full Report

This is version 1.3 of the entry. See complete history.

Literature

Crystal Structure of Staphylokinase Dimer Offers New Clue to Reduction of Immunogenicity

Rao, Z., Jiang, F., Liu, Y., Zhang, X., Chen, Y., Bartlam, M., Song, H., Ding, Y.

To be published.

Macromolecule Content

Total Structure Weight: 15.49 kDa
Atom Count: 997
Modelled Residue Count: 121
Deposited Residue Count: 136
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
STAPHYLOKINASE	A	136	Staphylococcus aureus	Mutation(s): 0 EC: 3.4.24.29
UniProt
Find proteins for P68802 (Staphylococcus aureus) Explore P68802 Go to UniProtKB: P68802
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	P68802
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free: 0.273
R-Value Work: 0.201
R-Value Observed: 0.216
Space Group: C 2 2 2₁

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.92	α = 90
b = 59.84	β = 90
c = 102.88	γ = 90

Software Package:

Software Name	Purpose
AMoRE	phasing
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling

Structure Validation

View Full Validation Report

Entry History

Deposition Data

Released Date: 2000-08-01

Deposition Author(s):

Revision History (Full details and data files)

Version 1.0: 2000-08-01
Type: Initial release
Version 1.1: 2008-04-26
Changes: Version format compliance
Version 1.2: 2011-07-13
Changes: Version format compliance
Version 1.3: 2023-12-27
Changes: Data collection, Database references

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.