Download MendeleyX-Ray Structures of Fv Fragment and its (4-Hydroxy-3-Nitrophenyl)Acetate Complex of Murine B1-8 Antibody
Simon, T., Henrick, K., Hirshberg, M., Winter, G.To be published.
1A6W
B1-8 FV FRAGMENT COMPLEXED WITH A (4-HYDROXY-5-IODO-3-NITROPHENYL) ACETATE COMPOUND
- PDB DOI: https://doi.org/10.2210/pdb1A6W/pdb
- Classification: IMMUNOGLOBULIN
- Organism(s): Mus musculus
- Mutation(s): Yes
- Deposited: 1998-03-03 Released: 1998-07-15
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Work: 0.171
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| B1-8 FV (LIGHT CHAIN) | A [auth L] | 109 | Mus musculus | Mutation(s): 1 |  |
UniProt | |||||
Find proteins for P01724 (Mus musculus) Explore P01724 Go to UniProtKB: P01724 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P01724 | ||||
Sequence AnnotationsExpand | |||||
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Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| B1-8 FV (HEAVY CHAIN) | B [auth H] | 120 | Mus musculus | Mutation(s): 1 |  |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NIP Query on NIP | C [auth H] | 4-HYDROXY-5-IODO-3-NITROPHENYLACETYL-EPSILON-AMINOCAPROIC ACID ANION C14 H16 I N2 O6 LKGGMBQFWIIXJM-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Work: 0.171
- Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 72.27 | α = 90 |
| b = 83.51 | β = 90 |
| c = 40.23 | γ = 90 |
| Software Name | Purpose |
|---|---|
| MOSFLM | data reduction |
| AGROVATA/ROTAVATA | data reduction |
| MLPHARE | phasing |
| PROLSQ | refinement |
| AGROVATA | data scaling |
| ROTAVATA | data scaling |
Entry History
Deposition Data
- Released Date: 1998-07-15 Deposition Author(s): Simon, T., Henrick, K., Hirshberg, M., Winter, G.
Revision History (Full details and data files)
- Version 1.0: 1998-07-15
Type: Initial release - Version 1.1: 2008-03-24
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Version format compliance
