1ZX8

CRYSTAL STRUCTURE OF an atypical cyclophilin (peptidylprolyl cis-trans isomerase) (TM1367) FROM THERMOTOGA MARITIMA AT 1.90 A RESOLUTION


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.166

Literature

Macromolecules
Sequence Display for 1ZX8

Classification: UNKNOWN FUNCTION

Total Structure Weight: 47538.45

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical protein TM1367 A, B, C 136 Thermotoga maritima Mutation: M1M, M54M, M84M
Gene Name(s): TM_1367 Tmari_1374
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
1PE
Query on 1PE

A, B PENTAETHYLENE GLYCOL
PEG400 (Synonym)
C10 H22 O6
JLFNLZLINWHATN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NI
Query on NI

C NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B, C L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 77.08 α = 90.00
b = 132.88 β = 90.00
c = 41.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-06-07
  • Released Date: 2005-07-26
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • 2008-04-30
    Type: Version format compliance
  • 2011-07-13
    Type: Advisory, Version format compliance