1ZUA

Crystal Structure Of AKR1B10 Complexed With NADP+ And Tolrestat


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.156
  • R-Value Work: 0.130

Literature

Macromolecules
Sequence Display for 1ZUA

Classification: OXIDOREDUCTASE

Total Structure Weight: 37310.44

Macromolecule Entities
Molecule Chains Length Organism Details
Aldo-keto reductase family 1 member B10 X 317 Homo sapiens EC#: 1.1.1 IUBMB
Mutation: D313N
Gene Name(s): AKR1B10 Gene View AKR1B11
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAP
Query on NAP

X NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE (Synonym)
C21 H28 N7 O17 P3
XJLXINKUBYWONI-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
TOL
Query on TOL

X TOLRESTAT
C16 H14 F3 N O3 S
LUBHDINQXIHVLS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TOL IC50: 1.2 - 54 nM (100) BindingDB
Ki: 50 nM (100) BindingDB

IC50: 10 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.25 Å
  • R-Value Free: 0.156
  • R-Value Work: 0.130
  • Space Group: P 61

Unit Cell:

Length (Å) Angle (°)
a = 89.11 α = 90.00
b = 89.11 β = 90.00
c = 78.43 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-05-30
  • Released Date: 2006-11-07
  • Deposition author(s): Gallego, O., Ruiz, F.X., Ardevol, A., Dominguez, M., Alvarez, R., de Lera, A.R., Rovira, C., Farres, J., Fita, I., Pares, X.

Revision History

  • Version 1_0: 2006-11-07

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance