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The structure of human glycinamide ribonucleotide transformylase in complex with alpha,beta-N-(hydroxyacetyl)-D-ribofuranosylamine and 10-formyl-5,8,dideazafolate
 
 
DOI:10.2210/pdb1zly/pdb
1ZLY
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Transferase
    Structure Weight: 22474.74
     
    Molecule:Phosphoribosylglycinamide formyltransferase
    Polymer:1Type:polypeptide(L)Length:203
    Chains:A
    EC#:2.1.2.2 Go to IUBMB EC entry  
    Fragment:residues 808-1010, GART
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens Go to NCBI Taxonomy entry Common Name: Human Expression System: Escherichia coli  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1MEJ  The apo structure of human glycinamide ribonucleotide transformylase 
    1MEN  The apo structure of human glycinamide ribonucleotide transformylase 
    1MEO  The apo structure of human glycinamide ribonucleotide transformylase 
    1NJS  Human glycinamide ribonucleotide transformylase complexed to 10-trifluoro-5,10-dideazaacyclic-5,6,7,8-tetrahydrofolic acid at pH 7 
    1ZLX  The apo structure of human glycinamide ribonucleotide transformylase at pH 6.3 
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    DQB     4-[(4-{[(2-AMINO-4-OXO-3,4-DIHYDROQUINAZOLIN- 6
    -YL)METHYL]AMINO}BENZOYL)AMINO]BUTANOIC ACID
    C20 H21 N5 O4 3DLigand Explorer Link out to Ligand Expos:DQB Link out to SuperLigands:DQB Link out to SuperHapten:DQB
    GRF     5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE C5 H12 N O7 P 3DLigand Explorer Link out to Ligand Expos:GRF Link out to SuperLigands:GRF Link out to SuperHapten:GRF
     
     
  •  
    Move Section Derived Data Hide
     
     
 
 
  •  
    Move Section Deposition Summary Hide
    Authors:   Dahms, T.E.S.,   Sainz, G.,   Giroux, E.L.,   Caperelli, C.A.,   Smith, J.L.

    Deposition:   2005-05-09
    Release:   2005-08-23
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors
    View a histogram of Resolution Resolution[Å]: 2.07
    R-Value: 0.200 (obs.)
    R-Free: 0.236
    Space Group: P 32 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 75.90 α = 90.00 
    b = 75.90 β = 90.00 
    c = 101.00 γ = 120.00