1YHF

Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes

Structural Biology Knowledgebase: 1YHF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.190

Literature

Macromolecules
Sequence Display for 1YHF

Classification: STRUCTURAL GENOMICS UNKNOWN FUNCTION

Total Structure Weight: 12931.96

Macromolecule Entities
Molecule Chains Length Organism Details
hypothetical protein SPy1581 A 115 Streptococcus pyogenes Mutation: M1M, M20M, M26M, M60M, M87M, M103M
Gene Name(s): SPy_1581
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.190
  • Space Group: P 41 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.90 α = 90.00
b = 39.90 β = 90.00
c = 144.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-01-07
  • Released Date: 2005-02-22
  • Deposition author(s): Osipiuk, J., Lezondra, L., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor