1Y26

A-riboswitch-adenine complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.231

Literature

Macromolecules
Sequence Display for 1Y26

Classification: RNA

Total Structure Weight: 22945.02

Macromolecule Entities
Molecule Chains Length Organism Details
Vibrio vulnificus A-riboswitch X 71 Vibrio vulnificus

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADE
Query on ADE

X ADENINE
C5 H5 N5
GFFGJBXGBJISGV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

X MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.297
  • R-Value Work: 0.231
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 49.65 α = 90.00
b = 155.04 β = 90.00
c = 25.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-11-20
  • Released Date: 2004-12-28
  • Deposition author(s): Serganov, A., Yuan, Y.R., Patel, D.J.

Revision History

  • Version 1_0: 2004-12-28

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Advisory, Version format compliance