1XVP

crystal structure of CAR/RXR heterodimer bound with SRC1 peptide, fatty acid and CITCO


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1XVP

Classification: DNA BINDING PROTEIN

Total Structure Weight: 117034.52

Macromolecule Entities
Molecule Chains Length Organism Details
Retinoic acid receptor RXR-alpha A, C 236 Homo sapiens Fragment: LBD domain
Gene Name(s): RXRA Gene View NR2B1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Orphan nuclear receptor NR1I3 B, D 246 Homo sapiens Fragment: LBD domain
Mutation: ΔV232, ΔS233, ΔP234, ΔT235
Gene Name(s): NR1I3 Gene View CAR
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
nuclear receptor coactivator 1 isoform 1 E, F, G, H 13 Homo sapiens EC#: 2.3.1.48 IUBMB
Fragment: Synthetic peptide-13 residues
Gene Name(s): NCOA1 Gene View BHLHE74 SRC1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CID
Query on CID

D 6-(4-CHLOROPHENYL)IMIDAZO[2,1-B][1,3]THIAZOLE- 5-CARBALDEHYDE O-(3,4-DICHLOROBENZYL)OXIME
C19 H12 Cl3 N3 O S
ZQWBOKJVVYNKTL-AUEPDCJTSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
F15
Query on F15

A, C PENTADECANOIC ACID
C15 H30 O2
WQEPLUUGTLDZJY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.180
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 128.02 α = 90.00
b = 128.02 β = 90.00
c = 212.18 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-10-28
  • Released Date: 2004-12-28
  • Deposition author(s): Xu, R.X., Lambert, M.H., Wisely, B.B., Warren, E.N., Weinert, E.E., Waitt, G.M., Williams, J.D., Moore, L.B., Willson, T.M., Moore, J.T.

Revision History

  • Version 1_0: 2004-12-28

    Type: Initial release

  • Version 1_1: 2008-04-30

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2016-11-30

    Type: Other, Source and taxonomy