1XPC

HUMAN ESTROGEN RECEPTOR ALPHA LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 19


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.184

Literature

Macromolecules
Sequence Display for 1XPC

Classification: HORMONE / GROWTH FACTOR RECEPTOR

Total Structure Weight: 28780.07

Macromolecule Entities
Molecule Chains Length Organism Details
Estrogen receptor A 248 Homo sapiens Fragment: LIGAND BINDING DOMAIN
Gene Name(s): ESR1 Gene View ESR NR3A1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AIT
Query on AIT

A (2S,3R)-3-(4-HYDROXYPHENYL)-2-(4-{[(2R)-2- PYRROLIDIN-1-YLPROPYL]OXY}PHENYL)-2,3-DIHYDRO- 1,4-BENZOXATHIIN-6-OL
COMPOUND 19 (Synonym)
C27 H29 N O4 S
UZOOIPXOYYJULJ-BLIZRMSTSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
AIT IC50: 1.7 nM (100) BindingDB

IC50: 1.7 nM  BindingMOAD
IC50: 1.7 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Observed: 0.184
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 58.69 α = 90.00
b = 58.69 β = 90.00
c = 277.18 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-10-08
  • Released Date: 2004-12-07
  • Deposition author(s): Fitzgerald, P.M.D., Sharma, N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values