1XDM

Structure of human aldolase B associated with hereditary fructose intolerance (A149P), at 291K

Structural Biology Knowledgebase: 1XDM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.319
  • R-Value Work: 0.271

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1XDM

Classification: LYASE

Total Structure Weight: 317242.87

Macromolecule Entities
Molecule Chains Length Organism Details
Fructose-bisphosphate aldolase B A, B, C..., D, W, X, Y, ZA, B, C, D, W, X, Y, Z 365 Homo sapiens EC#: 4.1.2.13 IUBMB
Mutation: A149P
Gene Name(s): ALDOB Gene View ALDB

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C, W, X, Y, Z SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.319
  • R-Value Work: 0.271
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 153.42 α = 90.00
b = 153.48 β = 90.00
c = 185.55 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-09-07
  • Released Date: 2005-03-22
  • Deposition author(s): Malay, A.D., Allen, K.N., Tolan, D.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4