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structure of oligonucleotide/drug complex
 
 
DOI:10.2210/pdb1xcs/pdb   NDB ID: DD0064
1XCS
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 4801.26
     
    Molecule:5'-D(*CP*GP*TP*AP*CP*G)-3'
    Polymer:1Type:polydeoxyribonucleotideLength:6
    Chains:A, B
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    A4L     9-[(5-(ACETYLAMINO)-6-{[(1S,4R)-8-AMINO-4- [((2R)-6-AMINO-2-{2-[(1S)-5-AMINO-1
    -FORMYLPENTYL]HYDRAZINO}HEXANOYL)AMINO]- 1-(4-AMINOBUTYL)-2,3-DIOXOOCTYL]AMINO}-6
    - OXOHEXYL)AMINO]-6-CHLORO-2-METHOXYACRIDINIUM     		C46 H73 Cl N11 O7 3DLigand Explorer Link out to Ligand Expos:A4L Link out to SuperLigands:A4L Link out to SuperHapten:A4L
    BA     BARIUM ION Ba 3DLigand Explorer Link out to Ligand Expos:BA Link out to SuperLigands:BA Link out to SuperHapten:BA
    CO     COBALT (II) ION Co 3DLigand Explorer Link out to Ligand Expos:CO Link out to SuperLigands:CO Link out to SuperHapten:CO
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Valls, N.,   Steiner, R.A.,   Wright, G.,   Murshudov, G.N.,   Subirana, J.A.

    Deposition:   2004-09-03
    Release:   2005-07-19
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 1.40
    R-Value: 0.199 (obs.)
    R-Free: 0.251
    Space Group: C 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 28.66 α = 90.00 
    b = 53.47 β = 90.00 
    c = 40.69 γ = 90.00