Complex structure of the C-terminal RNA-binding domain of hnRNP D(AUF1) with telomeric DNA
DOI:10.2210/pdb1x0f/pdb   NDB ID: 1X0F
1X0F
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 10334.56
    Molecule: 5'-D(P*TP*AP*GP*G)-3'
    Polymer: 1 Type: dna Length: 4
    Chains: B
    Molecule: Heterogeneous nuclear ribonucleoprotein D0
    Polymer: 2 Type: protein Length: 79
    Chains: A
    Fragment: C-terminal RNA-binding domain
    Organism: Homo sapiens
    Gene Names: Gene View for HNRNPD AUF1 HNRPD
    UniProtKB: Protein Feature View | Search PDB | Q14103  
     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli bl21(de3)  
     
  •   Related PDB Entries Hide
    Identifier Details
    1HD0   The minimized average structure of the N-terminal RNA-binding domain of hnRNP D 
    1HD1   The structures of the N-terminal RNA-binding domain of hnRNP D 
    1IQT   The 20 structures with the lowest energy of the C-terminal RNA-binding domain of hnRNP D 
    1WTB   The 20 structures with the lowest energy of the C-terminal RNA-binding domain of hnRNP D with d(TAGG) (database for torsion angles not used) 
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:1X0F
     
 
Data in orange boxes are gathered from external resources (when available).
Structure Image
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Enokizono, Y.,  Konishi, Y.,  Nagata, K.,  Ouhashi, K.,  Uesugi, S.,  Ishikawa, F.,  Katahira, M.

    Deposition:   2005-03-22
    Release:   2005-04-05
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   SOLUTION NMR
    Exp. Data:
    N/A
    NMR Ensemble
    Conformers Calculated:     228
    Conformers Submitted:     20
    Selection Criteria: structures with the lowest energy
    NMR Refine
    Method: SOLUTION NMR