1VTF

STRUCTURE OF 5'-D(*(BRO)CP*GP*(BRO)CP*G)-3' IN COMPLEX WITH PROFLAVINE

Structural Biology Knowledgebase: 1VTF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.269

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1VTF

Classification: DNA

Total Structure Weight: 3954.74

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*(BRO)CP*GP*(BRO)CP*G)-3') A, B 4 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PRL
Query on PRL

A, B PROFLAVIN
C13 H11 N3
WDVSHHCDHLJJJR-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CBR
Query on CBR
A, B DNA LINKING C9 H13 Br N3 O7 P DC

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Observed: 0.269
  • Space Group: P 65

Unit Cell:

Length (Å) Angle (°)
a = 17.90 α = 90.00
b = 17.90 β = 90.00
c = 44.50 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1988-12-13
  • Released Date: 2011-07-13
  • Deposition author(s): Westhof, E., Hosur, M.V., Sundaralingam, M.

Revision History

No revisions since initial release