Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome. This file, 1VSP, contains the 50S ribosome subunit. 30S ribosome subunit is in the file 2QNH     DOI:10.2210/pdb1vsp/pdb   NDB ID: RR0198

1VSP Display Files close FASTA Sequence PDB File PDB File (Header) mmCIF File mmCIF File (Header) PDBML/XML File PDBML/XML File (Header) Download Files close FASTA Sequence PDB File (Text) PDB File (gz) mmCIF File mmCIF File (gz) PDBML/XML File PDBML/XML File (gz) Structure Factor (Text) Structure Factor (gz) Biological Assembly (gz) (A) Print this Page Share this Page close Email Delicious Stumble Google More... Link this Page

Split Entry The asymmetric unit for this structure is composed of multiple PDB entries: 1VSP   2QNH   Download All Files          Primary Citation       Molecular Description Hide Classification: Ribosome Structure Weight: 1385786.22   Molecule: 23S LARGE SUBUNIT RIBOSOMAL RNA Polymer: 1 Type: polyribonucleotide Length: 2889 Chains: w Molecule: 5S LARGE SUBUNIT RIBOSOMAL RNA Polymer: 2 Type: polyribonucleotide Length: 120 Chains: x Molecule: 50S ribosomal protein L1 Polymer: 3 Type: polypeptide(L) Length: 229 Chains: A Molecule: 50S ribosomal protein L2 Polymer: 4 Type: polypeptide(L) Length: 276 Chains: B Molecule: 50S ribosomal protein L3 Polymer: 5 Type: polypeptide(L) Length: 206 Chains: C Molecule: 50S ribosomal protein L4 Polymer: 6 Type: polypeptide(L) Length: 205 Chains: D Molecule: 50S ribosomal protein L5 Polymer: 7 Type: polypeptide(L) Length: 182 Chains: E Molecule: 50S ribosomal protein L6 Polymer: 8 Type: polypeptide(L) Length: 180 Chains: F Molecule: 50S ribosomal protein L9 Polymer: 9 Type: polypeptide(L) Length: 148 Chains: G Molecule: 50S ribosomal protein L13 Polymer: 10 Type: polypeptide(L) Length: 140 Chains: H Molecule: 50S ribosomal protein L14 Polymer: 11 Type: polypeptide(L) Length: 122 Chains: I Molecule: 50S ribosomal protein L15 Polymer: 12 Type: polypeptide(L) Length: 150 Chains: J Molecule: 50S ribosomal protein L16 Polymer: 13 Type: polypeptide(L) Length: 141 Chains: K Molecule: 50S ribosomal protein L17 Polymer: 14 Type: polypeptide(L) Length: 118 Chains: L Molecule: 50S ribosomal protein L18 Polymer: 15 Type: polypeptide(L) Length: 112 Chains: M Molecule: 50S ribosomal protein L19 Polymer: 16 Type: polypeptide(L) Length: 146 Chains: N Molecule: 50S ribosomal protein L20 Polymer: 17 Type: polypeptide(L) Length: 118 Chains: O Molecule: 50S ribosomal protein L21 Polymer: 18 Type: polypeptide(L) Length: 101 Chains: P Molecule: 50S ribosomal protein L22 Polymer: 19 Type: polypeptide(L) Length: 113 Chains: Q Molecule: 50S ribosomal protein L23 Polymer: 20 Type: polypeptide(L) Length: 96 Chains: R Molecule: 50S ribosomal protein L24 Polymer: 21 Type: polypeptide(L) Length: 110 Chains: S Molecule: 50S ribosomal protein L25 Polymer: 22 Type: polypeptide(L) Length: 206 Chains: T Molecule: 50S ribosomal protein L27 Polymer: 23 Type: polypeptide(L) Length: 85 Chains: U Molecule: LSU ribosomal protein L28P Polymer: 24 Type: polypeptide(L) Length: 98 Chains: V Molecule: 50S ribosomal protein L29 Polymer: 25 Type: polypeptide(L) Length: 72 Chains: W Molecule: LSU ribosomal protein L30P Polymer: 26 Type: polypeptide(L) Length: 60 Chains: X Molecule: 50S ribosomal protein L32 Polymer: 27 Type: polypeptide(L) Length: 60 Chains: Y Molecule: 50S ribosomal protein L34 Polymer: 28 Type: polypeptide(L) Length: 49 Chains: Z Molecule: 50S ribosomal protein L35 Polymer: 29 Type: polypeptide(L) Length: 65 Chains: a Molecule: 50S ribosomal protein L36 Polymer: 30 Type: polypeptide(L) Length: 37 Chains: b       Source Hide Polymer: 1 Scientific Name: Thermus thermophilus hb27   Polymer: 2 Scientific Name: Thermus thermophilus hb27   Polymer: 3 Scientific Name: Thermus thermophilus hb27   Polymer: 4 Scientific Name: Thermus thermophilus hb27   Polymer: 5 Scientific Name: Thermus thermophilus hb27   Polymer: 6 Scientific Name: Thermus thermophilus hb27   Polymer: 7 Scientific Name: Thermus thermophilus hb27   Polymer: 8 Scientific Name: Thermus thermophilus hb27   Polymer: 9 Scientific Name: Thermus thermophilus hb27   Polymer: 10 Scientific Name: Thermus thermophilus hb27   Polymer: 11 Scientific Name: Thermus thermophilus hb27   Polymer: 12 Scientific Name: Thermus thermophilus hb27   Polymer: 13 Scientific Name: Thermus thermophilus hb27   Polymer: 14 Scientific Name: Thermus thermophilus hb27   Polymer: 15 Scientific Name: Thermus thermophilus hb27   Polymer: 16 Scientific Name: Thermus thermophilus hb27   Polymer: 17 Scientific Name: Thermus thermophilus hb27   Polymer: 18 Scientific Name: Thermus thermophilus hb27   Polymer: 19 Scientific Name: Thermus thermophilus hb27   Polymer: 20 Scientific Name: Thermus thermophilus hb27   Polymer: 21 Scientific Name: Thermus thermophilus hb27   Polymer: 22 Scientific Name: Thermus thermophilus hb27   Polymer: 23 Scientific Name: Thermus thermophilus hb27   Polymer: 24 Scientific Name: Thermus thermophilus hb27   Polymer: 25 Scientific Name: Thermus thermophilus hb27   Polymer: 26 Scientific Name: Thermus thermophilus hb27   Polymer: 27 Scientific Name: Thermus thermophilus hb27   Polymer: 28 Scientific Name: Thermus thermophilus hb27   Polymer: 29 Scientific Name: Thermus thermophilus hb27   Polymer: 30 Scientific Name: Thermus thermophilus hb27         Related PDB Entries Hide Id Details 2QNH  same structure, 30S SUBUNIT        Derived Data Hide SCOP Classification v1.75 - (11 Domains) CATH Classification v3.2.0 - (7 Domains) PFAM Classification - (31 Domains) GO Terms - (177 Terms)     Reset Layout

Biological Assembly     More Images... View in Jmol Composite of PDB entries (1VSP and 2QNH)         Deposition Summary Hide Authors:   Korostelev, A.,   Trakhanov, S.,   Asahara, H.,   Laurberg, M.,   Noller, H.F. Deposition:   2007-07-18 Release:   2007-11-13 Last Modified (REVDAT):   2009-11-03       Experimental Details Hide Method:   X-RAY DIFFRACTION Experimental Data:   Resolution[Å]: 3.83 R-Value: 0.327 (obs.) R-Free: 0.351 Space Group: I 4 2 2 Unit Cell:   Length [Å] Angles [°] a = 507.21 α = 90.00  b = 507.21 β = 90.00  c = 692.51 γ = 90.00        Structure Links Hide Molecule of the Month Features: 70S Ribosomes