1VLR

Crystal structure of mRNA decapping enzyme (DcpS) from Mus musculus at 1.83 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.83 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 1VLR

Classification: RNA BINDING PROTEIN

Total Structure Weight: 81382.80

Macromolecule Entities
Molecule Chains Length Organism Details
mRNA decapping enzyme A, B 350 Mus musculus Gene Name(s): Dcps Dcs1 Hint5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 65.40 α = 90.00
b = 59.23 β = 103.80
c = 100.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-08-10
  • Released Date: 2004-08-24
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4