1UE2

Crystal structure of d(GC38GAAAGCT)

Structural Biology Knowledgebase: 1UE2 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.209

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1UE2

Classification: DNA

Total Structure Weight: 3111.62

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*GP*(C38)P*GP*AP*AP*AP*GP*CP*T)-3' A 9 synthetic

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NCO
Query on NCO

A COBALT HEXAMMINE(III)
Co H18 N6
DYLMFCCYOUSRTK-FGTKAUEHAT
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
C38
Query on C38
A DNA LINKING C9 H13 I N3 O7 P DC

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.209
  • Space Group: P 63 2 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 36.74 α = 90.00
b = 36.74 β = 90.00
c = 64.75 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2003-05-08
  • Released Date: 2004-01-13
  • Deposition author(s): Sunami, T., Kondo, J., Hirao, I., Watanaba, K., Miura, K., Takenaka, A.

Revision History

  • 2014-10-22
    Type: Linkage | Details: remove incorrect link
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4