NMR Ensemble

1U6P

NMR Structure of the MLV encapsidation signal bound to the Nucleocapsid protein

Structural Biology Knowledgebase: 1U6P SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 20
  • Selection Criteria: Structures with the Least Restraint Violations

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1U6P

Classification: Viral protein / RNA

Total Structure Weight: 39147.28


Macromolecule Entities
Molecule Chains Length Organism Details
Gag polyprotein A 56 Murine leukemia virus Fragment: Nucleoprotein p10
Gene Name(s): gag
Macromolecule Entities
Molecule Chains Length Organism Details
101-MER B 101 synthetic MLV encapsidation signal RNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
AP7
Query on AP7
B RNA LINKING C10 H15 N5 O7 P A

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 20
  • Selection Criteria: structures with the least restraint violations

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-07-30
  • Released Date: 2004-11-02
  • Deposition author(s): D'Souza, V., Summers, M.F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update