1THG

1.8 ANGSTROMS REFINED STRUCTURE OF THE LIPASE FROM GEOTRICHUM CANDIDUM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.157

Literature

Macromolecules
Sequence Display for 1THG

Classification: HYDROLASE(CARBOXYLIC ESTERASE)

Total Structure Weight: 60612.58

Macromolecule Entities
Molecule Chains Length Organism Details
Lipase 2 A 544 Geotrichum candidum EC#: 3.1.1.3 IUBMB
Mutation: R4T, P5A, S6V
Gene Name(s): LIP2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NDG
Query on NDG

A 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
C8 H15 N O6
OVRNDRQMDRJTHS-PVFLNQBWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NAG
Query on NAG

A N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
PCA
Query on PCA
A L-PEPTIDE LINKING C5 H7 N O3 GLU

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Observed: 0.157
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 59.40 α = 90.00
b = 84.00 β = 100.10
c = 56.00 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1992-07-28
  • Released Date: 1993-10-31
  • Deposition author(s): Schrag, J.D., Cygler, M.

Revision History

  • Version 1_0: 1993-10-31

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Non-polymer description, Version format compliance

  • Version 1_3: 2016-01-13

    Type: Source and taxonomy