1T0K

Joint X-ray and NMR Refinement of Yeast L30e-mRNA complex

Structural Biology Knowledgebase: 1T0K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.261

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1T0K

Classification: RIBOSOME

Total Structure Weight: 63256.47


Macromolecule Entities
Molecule Chains Length Organism Details
Maltose-binding periplasmic protein A 381 Escherichia coli Gene Name(s): malE b4034 JW3994
60S ribosomal protein L30 B 105 Saccharomyces cerevisiae Details: see remark 400, COMPOUND
Gene Name(s): RPL30 Gene View RPL32 Gene View YGL030W
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*AP*CP*CP*GP*GP*AP*GP*UP*GP*UP*CP*C)-3' C 13 synthetic
5'-R(*G*GP*AP*CP*GP*CP*AP*GP*AP*GP*AP*UP*GP*GP*UP*C)-3' D 16 synthetic

Membrane Protein

Source: inferred by homology | Group: ALPHA-HELICAL

Subgroup Name: ATP Binding Cassette (ABC) Transporters

Protein Name: MalFGK2-MBP Maltose uptake transporter complex


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MTT
Query on MTT

A MALTOTETRAOSE
C24 H42 O21
LUEWUZLMQUOBSB-ZLBHSGTGSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.24 Å
  • R-Value Free: 0.320
  • R-Value Work: 0.261
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 136.01 α = 90.00
b = 136.01 β = 90.00
c = 123.81 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-04-09
  • Released Date: 2004-07-20
  • Deposition author(s): Chao, J.A., Williamson, J.R.
  • Previous versions: 1CK5 1CK8 1CN8 1CN9

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4