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RNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX
 
 
DOI:10.2210/pdb1sfo/pdb   NDB ID: PH0011
1SFO
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: Transcription/dna RNA Hybrid
    Structure Weight: 477655.30
     
    Molecule:RNA STRAND
    Polymer:1Type:polyribonucleotideLength:10
    Chains:R
    Other Details:TRANSCRIPT
    Molecule:DNA STRAND
    Polymer:2Type:polydeoxyribonucleotideLength:14
    Chains:T
    Other Details:TEMPLATE
    Molecule:DNA-directed RNA polymerase II largest subunit
    Polymer:3Type:polypeptide(L)Length:1733
    Chains:A
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerase II 140 kDa polypeptide
    Polymer:4Type:polypeptide(L)Length:1224
    Chains:B
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerase II 45 kDa polypeptide
    Polymer:5Type:polypeptide(L)Length:318
    Chains:C
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide
    Polymer:6Type:polypeptide(L)Length:215
    Chains:E
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide
    Polymer:7Type:polypeptide(L)Length:155
    Chains:F
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide
    Polymer:8Type:polypeptide(L)Length:146
    Chains:H
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerase II 14.2 kDa polypeptide
    Polymer:9Type:polypeptide(L)Length:122
    Chains:I
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerases I, II, and III 8.3 kDa polypeptide
    Polymer:10Type:polypeptide(L)Length:70
    Chains:J
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerase II 13.6 kDa polypeptide
    Polymer:11Type:polypeptide(L)Length:120
    Chains:K
    EC#:2.7.7.6 Go to IUBMB EC entry  
    Molecule:DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide
    Polymer:12Type:polypeptide(L)Length:70
    Chains:L
    EC#:2.7.7.6 Go to IUBMB EC entry  
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 2
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
    Polymer: 3
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 4
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 5
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 6
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 7
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 8
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 9
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 10
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 11
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
    Polymer: 12
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
     
     
  •  
    Move Section Related PDB Entries Hide
    Id Details
    1R9S   
    1R9T   
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
    ZN     ZINC ION Zn 3DLigand Explorer Link out to Ligand Expos:ZN Link out to SuperLigands:ZN Link out to SuperHapten:ZN
     
     
  •  
    Move Section Derived Data Hide
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Westover, K.D.,   Bushnell, D.A.,   Kornberg, R.D.

    Deposition:   2004-02-20
    Release:   2004-03-02
    Last Modified (REVDAT):   2009-02-24

    Previous versions: 1R9R
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   Download Structure Factors  [ EDS External Link to EDS ]
    View a histogram of Resolution Resolution[Å]: 3.61
    R-Value: 0.315 (obs.)
    R-Free: 0.343
    Space Group: C 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 167.08 α = 90.00 
    b = 221.26 β = 100.10 
    c = 193.68 γ = 90.00