1SDY

STRUCTURE SOLUTION AND MOLECULAR DYNAMICS REFINEMENT OF THE YEAST CU,ZN ENZYME SUPEROXIDE DISMUTASE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.158

Literature

Macromolecules
Sequence Display for 1SDY

Classification: OXIDOREDUCTASE(SUPEROXIDE ACCEPTOR)

Total Structure Weight: 63489.38

Macromolecule Entities
Molecule Chains Length Organism Details
COPPER,ZINC SUPEROXIDE DISMUTASE A, B, C, D 153 Saccharomyces cerevisiae EC#: 1.15.1.1 IUBMB
Gene Name(s): SOD1 Gene View YJR104C J1968
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, C, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CU
Query on CU

A, B, C, D COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Observed: 0.158
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 105.30 α = 90.00
b = 143.00 β = 90.00
c = 62.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1991-06-14
  • Released Date: 1994-01-31
  • Deposition author(s): Djinovic, K., Gatti, G., Coda, A., Antolini, L., Pelosi, G., Desideri, A., Falconi, M., Marmocchi, F., Rotilio, G., Bolognesi, M.

Revision History

  • 2008-03-03
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance