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Crystal Structure of AAV Rep complexed with the Rep-binding sequence
DOI:10.2210/pdb1rz9/pdb   NDB ID: PD0506
1RZ9
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Viral Protein/dna
    Structure Weight: 129867.38
    Molecule: 26-MER
    Polymer: 1 Type: dna Length: 26
    Chains: F
    Molecule: 26-MER
    Polymer: 2 Type: dna Length: 26
    Chains: G
    Molecule: Rep protein
    Polymer: 3 Type: protein Length: 197
    Chains: A, B, C, D, E
    Fragment: AAV5 Rep Nuclease Domain
    Organism: Adeno-associated virus - 5
    Gene Names: rep Rep22
    UniProtKB: Protein Feature View | Search PDB | Q9YJC1  
     
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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Adeno-associated virus - 5   Taxonomy   Expression System: Escherichia coli bl21(de3)  
     
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    Identifier Details
    1M55  Catalytic Domain Of The Adeno Associated Virus Type 5 Rep Protein 
     
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  • Nucleic Acid Database Hide
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Hickman, A.B.,  Ronning, D.R.,  Perez, Z.N.,  Kotin, R.M.,  Dyda, F.

    Deposition:   2003-12-24
    Release:   2004-02-17
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   3.10
    R-Value: 0.286 (obs.)
    R-Free: 0.315
    Space Group: P 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 78.67 α = 90.00 
    b = 131.71 β = 112.68 
    c = 82.16 γ = 90.00