1R10

Cystic fibrosis transmembrane conductance regulator (CFTR) nucleotide-binding domain one (NBD1) with ATP, I4122 space group


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1R10

Classification: TRANSPORT PROTEIN

Total Structure Weight: 65439.78

Macromolecule Entities
Molecule Chains Length Organism Details
Cystic fibrosis transmembrane conductance regulator A, B 286 Mus musculus Fragment: NBD1 domain (residues 389-673)
Gene Name(s): Cftr Abcc7
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A, B ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ACY
Query on ACY

A, B ACETIC ACID
C2 H4 O2
QTBSBXVTEAMEQO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ATP N/A in BindingDB
N/A in BindingMoad
Kd: 149000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.228
  • Space Group: I 41 2 2

Unit Cell:

Length (Å) Angle (°)
a = 141.20 α = 90.00
b = 141.20 β = 90.00
c = 279.46 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-09-23
  • Released Date: 2003-12-09
  • Deposition author(s): Lewis, H.A., Buchanan, S.G., Burley, S.K., Conners, K., Dickey, M., Dorwart, M., Fowler, R., Gao, X., Guggino, W.B., Hendrickson, W.A.

Revision History

  • 2008-04-29
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance