1QYE

Crystal Structure of the N-domain of the ER Hsp90 chaperone GRP94 in complex with 2-chlorodideoxyadenosine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1QYE

Classification: CHAPERONE

Total Structure Weight: 31046.18

Macromolecule Entities
Molecule Chains Length Organism Details
Endoplasmin A 269 Canis lupus Fragment: Residues 69-337
Gene Name(s): HSP90B1 Gene View GRP94 TRA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CDY
Query on CDY

A 2-CHLORODIDEOXYADENOSINE
C10 H12 Cl N5 O2
FNLILOONPKMGST-NTSWFWBYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
M2M
Query on M2M

A 1-METHOXY-2-(2-METHOXYETHOXY)ETHANE
C6 H14 O3
SBZXBUIDTXKZTM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.272
  • R-Value Work: 0.207
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 87.01 α = 90.00
b = 98.97 β = 90.00
c = 63.25 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-09-10
  • Released Date: 2003-11-11
  • Deposition author(s): Soldano, K.L., Jivan, A., Nicchitta, C.V., Gewirth, D.T.

Revision History

  • Version 1_0: 2003-11-11

    Type: Initial release

  • Version 1_1: 2008-04-29

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance